---
title: "ADGC ADC Round 11"
id: "5759"
type: "sample_set"
slug: "snd10068"
published_at: "2024-02-07T19:37:20+00:00"
modified_at: "2024-02-07T19:37:21+00:00"
url: "https://dss.niagads.org/sample-sets/snd10068/"
markdown_url: "https://dss.niagads.org/sample-sets/snd10068.md"
excerpt: "The ADC11 sample set was genotyped by the Center for Applied Genomics at the Children’s Hospital of Philadelphia using the Illumina Infinium Global Screening Array (GSAMD-24v2-0_20024620_A1) BeadChip which captures genotype data on 759,993 genomic SNPs. The standard Alzheimer’s Disease Genetics..."
---

## Description

The ADC11 sample set was genotyped by the Center for Applied Genomics at the Children’s Hospital of Philadelphia using the Illumina Infinium Global Screening Array (GSAMD-24v2-0_20024620_A1) BeadChip which captures genotype data on 759,993 genomic SNPs. The standard Alzheimer’s Disease Genetics Consortium (ADGC) quality control pipeline (Naj et al. 2011) was applied to this GWAS dataset.

## Cohorts

- [NIA Alzheimer's Disease Research Centers (ADRC)](https://dss.niagads.org/cohorts/nia-alzheimers-disease-research-centers-adrc/)

## Sex

### Total number of samples: 2,679

Female1,62460.6 %

Male1,05439.3 %

Sex not reported: 1

## Race

### Total number of samples: 2,679

| American Indian/Alaska Native | 33 |
| --- | --- |
| Asian | 76 |
| Native Hawaiian or Other Pacific Islander | 1 |
| Black or African American | 613 |
| White | 1,815 |
| Other | 122 |
| NA | 19 |

## Ethnicity

### Total number of samples: 2,679

Not Hispanic or Latino

2,130

79.5%

Hispanic or Latino

501

18.7%

Not Applicable/Not Available

48

1.8%

## Diagnosis

### Total number of samples: 2,679

| AD |  |  |
| --- | --- | --- |
| Control | 895 | 33.4% |
| Case | 696 | 26.0% |
| Unknown | 1,088 | 40.6% |

## APOE

### Total number of samples: 2,679

- 225 (0.2%)
- 23223 (8.3%)
- 2467 (2.5%)
- 331,294 (48.3%)
- 34880 (32.8%)
- 44206 (7.7%)
- NA4 (0.1%)