---
title: "Camouflaged Variants"
id: "5573"
type: "sample_set"
slug: "snd10074"
published_at: "2024-02-28T17:21:36+00:00"
modified_at: "2024-02-28T17:21:37+00:00"
url: "https://dss.niagads.org/sample-sets/snd10074/"
markdown_url: "https://dss.niagads.org/sample-sets/snd10074.md"
excerpt: "Provided here are variant calls in VCF format for 14,526 samples derived from the ADSP whole-exome and whole-genome sequencing dataset (available via DSS: NG00067)."
---

## Description

Provided here are variant calls in VCF format for 14,526 samples derived from the ADSP whole-exome and whole-genome sequencing dataset (available via DSS: [NG00067](https://dss.niagads.org/datasets/ng00067/)
).

## Cohorts

- [Adult Changes in Thought (ACT)](https://dss.niagads.org/cohorts/adult-changes-in-thought-act/)
- [Atherosclerosis Risk in Communities (ARIC)](https://dss.niagads.org/cohorts/atherosclerosis-risk-in-communities-aric/)
- [Cardiovascular Health Study (CHS)](https://dss.niagads.org/cohorts/cardiovascular-health-study-chs/)
- [Chicago Health and Aging Project (CHAP)](https://dss.niagads.org/cohorts/chicago-health-and-aging-project-chap/)
- [Erasmus Rucphen Family (ERF)](https://dss.niagads.org/cohorts/erasmus-rucphen-family-erf/)
- [Estudio Familiar de Influencia Genetica en Alzheimer (EFIGA)](https://dss.niagads.org/cohorts/estudio-familiar-de-influencia-genetica-en-alzheimer-efiga/)
- [Framingham Heart Study (FHS)](https://dss.niagads.org/cohorts/framingham-heart-study-fhs/)
- [Genetic Differences (GenDiff)](https://dss.niagads.org/cohorts/genetic-differences-gendiff/)
- [Indianapolis-Ibadan (IIAA/IIBD)](https://dss.niagads.org/cohorts/indianapolis-ibadan-iiaa/)
- [Mayo Clinic (MAYO)](https://dss.niagads.org/cohorts/mayo/)
- [Multi-Institutional Research in Alzheimer's Genetic Epidemiology (MIRAGE)](https://dss.niagads.org/cohorts/multi-institutional-research-in-alzheimers-genetic-epidemiology-mirage/)
- [National Centralized Repository for Alzheimer’s Disease and Related Dementias Family (NCRAD Family)](https://dss.niagads.org/cohorts/national-centralized-repository-for-alzheimers-disease-and-related-dementias-family-ncrad-family/)
- [National Institute of Aging Alzheimer’s Disease Family Based Study (NIA AD-FBS)](https://dss.niagads.org/cohorts/national-institute-on-aging-late-onset-of-alzheimers-disease-family-nia-load/)
- [NIA Alzheimer's Disease Research Centers (ADRC)](https://dss.niagads.org/cohorts/nia-alzheimers-disease-research-centers-adrc/)
- [Religious Orders Study/Memory and Aging Project (ROSMAP)](https://dss.niagads.org/cohorts/religious-orders-study-memory-and-aging-project-rosmap/)
- [Rotterdam Study (RS)](https://dss.niagads.org/cohorts/rotterdam-study-rs/)
- [Texas Alzheimer’s Research and Care Consortium (TARCC)](https://dss.niagads.org/cohorts/texas-alzheimers-research-and-care-consortium-tarcc/)
- [University of Miami (MIA)](https://dss.niagads.org/cohorts/university-of-miami-mia/)
- [University of Toronto (TOR)](https://dss.niagads.org/cohorts/university-of-toronto/)
- [University of Washington Families (RAS)](https://dss.niagads.org/cohorts/university-of-washington-families-ras/)
- [Vanderbilt University (VAN)](https://dss.niagads.org/cohorts/vanderbilt-university-van/)
- [Washington Heights and Inwood Community Aging project (WHICAP)](https://dss.niagads.org/cohorts/washington-heights-and-inwood-community-aging-project-whicap/)

## Sex

### Total number of samples: 14,526

Female8,71860.0 %

Male5,78639.8 %

Sex not reported: 22

## Race

### Total number of samples: 14,526

| American Indian/Alaska Native | 2 |
| --- | --- |
| Native Hawaiian or Other Pacific Islander | 1 |
| Black or African American | 1,024 |
| White | 11,954 |
| Other | 1,520 |
| NA | 25 |

## Ethnicity

### Total number of samples: 14,526

Not Hispanic or Latino

12,462

85.8%

Hispanic or Latino

1,926

13.3%

Not Applicable/Not Available

138

1.0%

## Diagnosis

### Total number of samples: 14,526

| AD |  |  |
| --- | --- | --- |
| Control | 6,032 | 41.5% |
| Case | 7,741 | 53.3% |
| Other | 9 | 0.1% |
| Unknown | 722 | 5.0% |

| NA |  |  |
| --- | --- | --- |
| Unknown | 22 | 0.2% |

## APOE

### Total number of samples: 14,526

- 2286 (0.6%)
- 231,629 (11.2%)
- 24287 (2.0%)
- 338,156 (56.1%)
- 343,975 (27.4%)
- 44363 (2.5%)
- NA30 (0.2%)