---
title: "ASPREE1 WGS"
id: "7357"
type: "sample_set"
slug: "snd10093"
published_at: "2024-11-27T16:02:45+00:00"
modified_at: "2024-11-27T16:02:46+00:00"
url: "https://dss.niagads.org/sample-sets/snd10093/"
markdown_url: "https://dss.niagads.org/sample-sets/snd10093.md"
excerpt: "2,795 samples were sequenced at Kinghorn Centre for Clinical Genomics (KCCG) in Sydney, Australia, on Illumina HiSeqX. CRAM files were sent to GCAD for processing. A total of 2,735 samples passed sequencing metrics and quality control checks."
---

## Description

2,795 samples were sequenced at Kinghorn Centre for Clinical Genomics (KCCG) in Sydney, Australia, on Illumina HiSeqX. CRAM files were sent to GCAD for processing. A total of 2,735 samples passed sequencing metrics and quality control checks.

## Cohorts

- [ASPrin in Reducing Events in the Elderly (ASPREE) & ASPREE-XT](https://dss.niagads.org/cohorts/asprin-in-reducing-events-in-the-elderly-aspree/)

## Sex

### Total number of samples: 2,735

Female1,55957.0 %

Male1,17643.0 %

## Race

### Total number of samples: 2,735

| Asian | 14 |
| --- | --- |
| Native Hawaiian or Other Pacific Islander | 1 |
| Black or African American | 1 |
| White | 2,704 |
| Other | 13 |
| NA | 2 |

## Ethnicity

### Total number of samples: 2,735

Not Hispanic or Latino

2,714

99.2%

Hispanic or Latino

21

0.8%

## Diagnosis

### Total number of samples: 2,735

| AD |  |  |
| --- | --- | --- |
| Control | 2,524 | 92.3% |
| Case | 211 | 7.7% |

## APOE

### Total number of samples: 2,735

- 2215 (0.5%)
- 23381 (13.9%)
- 2477 (2.8%)
- 331,679 (61.4%)
- 34535 (19.6%)
- 4431 (1.1%)
- NA17 (0.6%)