---
title: "Amyloid-WU WGS"
id: "7381"
type: "sample_set"
slug: "snd10098"
published_at: "2024-11-27T15:56:59+00:00"
modified_at: "2024-11-27T15:57:00+00:00"
url: "https://dss.niagads.org/sample-sets/snd10098/"
markdown_url: "https://dss.niagads.org/sample-sets/snd10098.md"
excerpt: "The sample dataset was collected from the KnightADRC cohort. 1,113 participants were sequenced by MGI using Illumina NovaSeq technology. FASTQ and BAM files were sent to GCAD for processing. A total of 1,070 samples passed sequencing metrics and quality control..."
---

## Description

The sample dataset was collected from the KnightADRC cohort. 1,113 participants were sequenced by MGI using Illumina NovaSeq technology. FASTQ and BAM files were sent to GCAD for processing. A total of 1,070 samples passed sequencing metrics and quality control checks.

## Cohorts

- [Knight Alzheimer’s Disease Research Center (KGAD)](https://dss.niagads.org/cohorts/knight-alzheimers-disease-research-center-kgad/)

## Sex

### Total number of samples: 1,070

Female59555.6 %

Male47544.4 %

## Race

### Total number of samples: 1,070

| American Indian/Alaska Native | 3 |
| --- | --- |
| Asian | 4 |
| Black or African American | 126 |
| White | 932 |
| Other | 5 |

## Ethnicity

### Total number of samples: 1,070

Not Hispanic or Latino

920

86.0%

Not Applicable/Not Available

150

14.0%

## Diagnosis

### Total number of samples: 1,070

| AD |  |  |
| --- | --- | --- |
| Control | 629 | 58.8% |
| Case | 340 | 31.8% |
| Unknown | 101 | 9.4% |

## APOE

### Total number of samples: 1,070

- 229 (0.8%)
- 23126 (11.8%)
- 2435 (3.3%)
- 33511 (47.8%)
- 34337 (31.5%)
- 4449 (4.6%)
- NA3 (0.3%)