The first release, 2018.07.30, includes Compressed Sequence Alignment files (CRAMs) mapped to GRCh38 and GATK-called gVCFs from the ADSP and ADNI studies. These data were called by the Genome Center for Alzheimer’s Disease (GCAD) using VCPA 1.0, a functionally equivalent CCDG/TOPMed pipeline.
Category: Platform
NG00067 V16 – ADSP Umbrella
The first release, 2018.07.30, includes Compressed Sequence Alignment files (CRAMs) mapped to GRCh38 and GATK-called gVCFs from the ADSP and ADNI studies. These data were called by the Genome Center for Alzheimer’s Disease (GCAD) using VCPA 1.0, a functionally equivalent CCDG/TOPMed pipeline.
NG00130.v1 – Large scale CSF proteogenomic atlas
The p-value only files are available in the “Open Access Dataset” tab.To access the full data, please log into DSS and submit an application.Within the application, add this dataset (accession NG00130) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within…
NG00171 – Population Structure in LASI-DAD
To access the dataset, please log into DSS and submit an application.Within the application, add this dataset (accession NG00171) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within the DARM portal.
NG00178 – Multi-brain region mRNA-seq of sporadic ALS patients with pTDP-43 pathological staging
To access this data, please log into DSS and submit an application.Within the application, add this dataset (accession NG00178) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within the DARM portal.
NG00131.v1 – Large scale genetics study on CSF and brain metabolite levels
The p-value only files are available in the “Open Access Dataset” tab.To access the full data, please log into DSS and submit an application.Within the application, add this dataset (accession NG00131) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within…
NG00067 V15 – ADSP Umbrella
The first release, 2018.07.30, includes Compressed Sequence Alignment files (CRAMs) mapped to GRCh38 and GATK-called gVCFs from the ADSP and ADNI studies. These data were called by the Genome Center for Alzheimer’s Disease (GCAD) using VCPA 1.0, a functionally equivalent CCDG/TOPMed pipeline.
NG00035 – GWAS of CSF tau levels identifies risk variants for Alzheimer’s Disease
To access the full dataset, please log into DSS and submit an application.Within the application, add this dataset (accession NG00035) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within the DARM portal.
NG00082 – UAB/HudsonAlpha Families with Neurodegenerative Diseases
To access the full dataset, please log into DSS and submit an application.Within the application, add this dataset (accession NG00082) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within the DARM portal. This dataset was originally published on the NIAGADS…
NG00052 – CLU, A potential endophenotype for AD: Summary Statistics – Deming et al. (2016)
All data provided in this dataset are open access and are available publicly in the “Open Access Dataset” tab.