Advanced Modeling in Alzheimer's Cohorts and Trials
- PI
- Ezzati, Ali
- DAR ID
- 11430
- Initial Approval Date
- January 28, 2025
- Current DAR Status
- Active
- PI Institution
- University of California, Irvine
- PI Institution Country
- United States
- PI Institution Type
- Non-Profit
Requested Datasets (19)
NG00067Alzheimer's Disease Sequencing Project Umbrella StudyNG00113Metabolomic and lipidomic signatures in Alzheimer disease brainsNG00127A longitudinal study of Alzheimer's Disease and other dementing illnesses – KnightADRC GWASNG00102Genomic atlas of the proteome from brain, CSF and plasma prioritizes proteins implicated in neurological disordersNG00022ADC1 - Alzheimer's Disease Center Dataset 1NG00023ADC2 - Alzheimer's Disease Center Dataset 2NG00024ADC3 - Alzheimer's Disease Center Dataset 3NG00068ADC4 - Alzheimer's Disease Center Dataset 4NG00069ADC5 - Alzheimer's Disease Center Dataset 5NG00070ADC6 - Alzheimer's Disease Center Dataset 6NG00071ADC7 - Alzheimer's Disease Center Dataset 7NG00136ADC8 - Alzheimer's Disease Center Dataset 8
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NG00137ADC9 - Alzheimer's Disease Center Dataset 9NG00138ADC10 - Alzheimer's Disease Center Dataset 10NG00139ADC11 - Alzheimer's Disease Center Dataset 11NG00140ADC12 - Alzheimer's Disease Center Dataset 12NG00149ADC13 - Alzheimer's Disease Center Dataset 13NG00150ADC14 - Alzheimer's Disease Center Dataset 14NG00151ADC15 - Alzheimer's Disease Center Dataset 15
Research Use Statement
We aim to develop robust, calibrated, and reliable predictive models by utilizing machine learning techniques on a rich dataset of imaging, omics, and phenotypic data. Our approach is twofold:
1. We will employ supervised machine learning methods to construct predictive models for defined outcomes such as clinical disease stages, meaningful cognitive decline, and imaging and neuropathologic markers (e.g., amyloid or tau positivity). We acknowledge that a major challenge in implementing predictive models is their integration into real-world settings. Therefore, once validated, we will convert these models into web applications or simplify them into risk scores to improve their usability and practical application.
2. Given the significant heterogeneity in Alzheimer's disease and existing gaps in our mechanistic understanding, we will utilize semi-supervised machine learning to subtype the disease. This method will incorporate genetics, biofluid biomarkers, imaging, and neuropsychological tests. Our methodology offers a significant advantage over the unsupervised machine and deep learning techniques commonly used in the field. By incorporating "partial labeling" and incorporating knowledge of disease states, our semi-supervised approach enables more clinically relevant disease subtyping and results.
For this project, we are collaborating with experts from other institutions, including Dr. Christos Davatzikos from the University of Pennsylvania, who is an expert in neuroimaging and machine learning, and Dr. Richard Lipton from Albert Einstein College of Medicine, known for his expertise in epidemiology and the design of trials and cohorts.
1. We will employ supervised machine learning methods to construct predictive models for defined outcomes such as clinical disease stages, meaningful cognitive decline, and imaging and neuropathologic markers (e.g., amyloid or tau positivity). We acknowledge that a major challenge in implementing predictive models is their integration into real-world settings. Therefore, once validated, we will convert these models into web applications or simplify them into risk scores to improve their usability and practical application.
2. Given the significant heterogeneity in Alzheimer's disease and existing gaps in our mechanistic understanding, we will utilize semi-supervised machine learning to subtype the disease. This method will incorporate genetics, biofluid biomarkers, imaging, and neuropsychological tests. Our methodology offers a significant advantage over the unsupervised machine and deep learning techniques commonly used in the field. By incorporating "partial labeling" and incorporating knowledge of disease states, our semi-supervised approach enables more clinically relevant disease subtyping and results.
For this project, we are collaborating with experts from other institutions, including Dr. Christos Davatzikos from the University of Pennsylvania, who is an expert in neuroimaging and machine learning, and Dr. Richard Lipton from Albert Einstein College of Medicine, known for his expertise in epidemiology and the design of trials and cohorts.
Non-Technical Summary
Despite the extensive research on Alzheimer's and other dementias, the success rate of randomized clinical trials has been disappointingly low. This is primarily due to the significant clinical variations among patients, which limits our ability to predict their outcomes accurately. To address this challenge, we aim to develop a predictive framework specifically focusing on Alzheimer's and related dementias. We will use several cohorts and will employ machine learning and advanced statistical modeling on various types of data, including demographics, neuropsychological measures, biofluid and imaging biomarkers from existing international cohorts and concluded clinical trials. The framework will enable us to predict disease progression which will facilitate early intervention and personalized care for individuals at risk of developing dementia. Our project seeks to harness the power of machine learning and advanced analytics to improve our understanding of Alzheimer's Disease, enhance prediction accuracy, and ultimately contribute to more effective treatments and interventions.
Reported Publications
Publications shown are those reported by investigators through NIAGADS DAR reporting and renewal processes and may not represent a complete list of publications associated with the project.
No publications have been reported for this DAR.