Description
NACC Genentech WGS samples were whole-genome sequenced at Illumina on the HiSeq2000 machine. Samples in either format (BAM files from hg37 build and FASTQ files) were sent to GCAD for processing on the VCPA1.1 pipeline. 137 samples passed sequencing metrics and quality control.
Sex
Total number of samples: 137
Female 56 40.9 %
Male 81 59.1 %
Race
Total number of samples: 137
| White | 137 |
Ethnicity
Total number of samples: 137
Not Hispanic or Latino
137
100.0%
Diagnosis
Total number of samples: 137
| AD | ||
|---|---|---|
| Control | 5 | 3.6% |
| Case | 129 | 94.2% |
| Unknown | 3 | 2.2% |
APOE
Total number of samples: 137
- 331 (0.7%)
- 3479 (57.7%)
- 4457 (41.6%)