Description
2,768 LASI-DAD respondents from 18 diverse ethno-linguistic and genographic groups across India who consented to the blood sample collection samples were sequenced at Medgenome on the HiSeqX machine. FASTQ files were sent to GCAD for processing on the VCPA 1.1 pipeline. A total of 2,686 samples passed sequencing metrics and quality control checks (including 6 technical replicates sequenced with ADSP rounds).
Sex
Total number of samples: 2,686
Female 1,413 52.6 %
Male 1,273 47.4 %
Race
Total number of samples: 2,686
| Asian | 2,682 |
| Black or African American | 1 |
| Other | 3 |
Ethnicity
Total number of samples: 2,686
Not Hispanic or Latino
2,683
99.9%
Hispanic or Latino
3
0.1%
Diagnosis
Total number of samples: 2,786
| AD | ||
|---|---|---|
| Control | 2,495 | 89.6% |
| Case | 191 | 6.9% |
| Unknown | 100 | 3.6% |
APOE
Total number of samples: 2,686
- 231 (0.0%)
- 331 (0.0%)
- 342 (0.1%)
- NA2,682 (99.9%)