Description
The ADC12 sample set was genotyped by the Center for Applied Genomics at the Children’s Hospital of Philadelphia using the Illumina Infinium GSAMD-24v2-0_20024620_A1 BeadChip which captures genotype data on 759,993 genomic SNPs. The standard Alzheimer’s Disease Genetics Consortium (ADGC) quality control pipeline (Naj et al. 2011) was applied to this GWAS dataset.
Sex
Total number of samples: 1,320
Female 740 56.1 %
Male 579 43.9 %
Race
Total number of samples: 1,320
| American Indian/Alaska Native | 3 |
| Asian | 41 |
| Native Hawaiian or Other Pacific Islander | 2 |
| Black or African American | 105 |
| White | 1,148 |
| Other | 19 |
| NA | 2 |
Ethnicity
Total number of samples: 1,320
Not Hispanic or Latino
1,203
91.1%
Hispanic or Latino
108
8.2%
Not Applicable/Not Available
9
0.7%
Diagnosis
Total number of samples: 1,320
| AD | ||
|---|---|---|
| Control | 384 | 29.1% |
| Case | 284 | 21.5% |
| Unknown | 652 | 49.4% |
APOE
Total number of samples: 1,320
- 2213 (1.0%)
- 23123 (9.3%)
- 2428 (2.1%)
- 33629 (47.7%)
- 34435 (33.0%)
- 4492 (7.0%)