Description
659 samples were sequenced by USUHS and Macrogen on the NovaSeq and Illumina HiSeq 2500 platform. GCAD received FASTQ and CRAM files for processing. A total of 646 samples passed sequencing metrics and quality control checks.
Sex
Total number of samples: 646
Female 412 63.8 %
Male 234 36.2 %
Race
Total number of samples: 646
| Black or African American | 17 |
| White | 628 |
| Other | 1 |
Ethnicity
Total number of samples: 646
Not Hispanic or Latino
594
92.0%
Hispanic or Latino
1
0.2%
Not Applicable/Not Available
51
7.9%
Diagnosis
Total number of samples: 646
| AD | ||
|---|---|---|
| Control | 51 | 7.9% |
| Case | 523 | 81.0% |
| Other | 33 | 5.1% |
| Unknown | 39 | 6.0% |
APOE
Total number of samples: 646
- 2331 (4.8%)
- 2420 (3.1%)
- 33204 (31.6%)
- 34270 (41.8%)
- 44109 (16.9%)
- NA12 (1.9%)