Description
A total of 999 NIA-FBS cohort samples were sequenced at NYGC on the Illumina HiSeqX platform. The BAM files were sent to GCAD for processing through the VCPA1.1 pipeline. A total of 997 samples passed sequencing metrics and quality control checks.
Sex
Total number of samples: 997
Female 616 61.8 %
Male 381 38.2 %
Race
Total number of samples: 997
| American Indian/Alaska Native | 8 |
| Asian | 16 |
| Black or African American | 93 |
| White | 874 |
| Other | 2 |
| NA | 4 |
Ethnicity
Total number of samples: 997
Not Hispanic or Latino
975
97.8%
Hispanic or Latino
16
1.6%
Not Applicable/Not Available
6
0.6%
Diagnosis
Total number of samples: 1,028
| AD | ||
|---|---|---|
| Control | 381 | 37.1% |
| Case | 539 | 52.4% |
| Other | 77 | 7.5% |
| Unknown | 31 | 3.0% |
APOE
Total number of samples: 997
- 2337 (3.7%)
- 2420 (2.0%)
- 33290 (29.1%)
- 34412 (41.3%)
- 44190 (19.1%)
- NA48 (4.8%)