A total of 1,362 HABS cohort samples were sequenced at USUHS using the NovaSeq and NovaSeqX platforms. The FASTQ files were sent to GCAD for processing through the VCPA1.1 pipeline. A total of 1,359 samples passed sequencing metrics and quality control checks.

Total number of samples: 1,359

Female 840 61.8 %
Male 519 38.2 %

Total number of samples: 1,359

Black or African American171
White1,174
NA14

Total number of samples: 1,359

Not Hispanic or Latino
794
58.4%
Hispanic or Latino
560
41.2%
Not Applicable/Not Available
5
0.4%

Total number of samples: 1,359

AD
Unknown1,359100.0%

Total number of samples: 1,359

  • 225 (0.4%)
  • 23132 (9.7%)
  • 2423 (1.7%)
  • 33869 (63.9%)
  • 34296 (21.8%)
  • 4427 (2.0%)
  • NA7 (0.5%)