The first release, 2018.07.30, includes Compressed Sequence Alignment files (CRAMs) mapped to GRCh38 and GATK-called gVCFs from the ADSP and ADNI studies. These data were called by the Genome Center for Alzheimer’s Disease (GCAD) using VCPA 1.0, a functionally equivalent CCDG/TOPMed pipeline.
Category: Disease
NG00130 – Large scale CSF proteogenomic atlas
The p-value only files are available in the “Open Access Dataset” tab.To access the full data, please log into DSS and submit an application.Within the application, add this dataset (accession NG00130) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within…
NG00118 – AMP-AD SV WGS and SV-xQTL
To access this data, please log into DSS and submit an application.Within the application, add this dataset (accession NG00118) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within the DARM portal.
NG00126 – A fast and robust strategy to remove variant level artifacts in Alzheimer’s Disease Sequencing Project data (Belloy et al. 2022)
The p-value only files are available in the “Public Dataset” tab. To access the full data, please log into DSS and submit an application. Within the application, add this dataset (accession NG00126) in the “Choose a dataset” section. Once approved, you will be able to log in and access the…
NG00129 – NCRAD Families WES
To access this data, please log into DSS and submit an application.Within the application, add this dataset (accession NG00129) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within the DARM portal.
NG00128 – Proteomic profiling identified plasma biomarkers for SARS-CoV-2 infection and severity of COVID-19 patients
To access this data, please log into DSS and submit an application.Within the application, add this dataset (accession NG00128) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within the DARM portal.
NG00117 – NCRAD Families GWAS
To access this data, please log into DSS and submit an application. Within the application, add this dataset (accession NG00117) in the “Choose a dataset” section. Once approved, you will be able to log in and access the data within the DARM portal.
NG00127 – A longitudinal study of Alzheimer’s Disease and other dementing illnesses – KnightADRC GWAS
To access this data, please log into DSS and submit an application.Within the application, add this dataset (accession NG00127) in the “Choose a Dataset” section.Once approved, you will be able to log in and access the data within the DARM portal.
NG00067 v8 – ADSP Umbrella
The first release, 2018.07.30, includes Compressed Sequence Alignment files (CRAMs) mapped to GRCh38 and GATK-called gVCFs from the ADSP and ADNI studies. These data were called by the Genome Center for Alzheimer’s Disease (GCAD) using VCPA 1.0, a functionally equivalent CCDG/TOPMed pipeline.