ADGC African American samples were sequenced at University of Miami on the HiSeq3000 machine.  3226 samples were sequenced using the Agilent WES v6 target capture kit. BAM files from hg37 build were sent to GCAD for processing on the VCPA1.1 pipeline. 2763 passed sequencing metrics and quality control.

Total number of samples: 3,158

Female 2,256 71.4 %
Male 902 28.6 %

Total number of samples: 3,158

Black or African American3,155
White3

Total number of samples: 3,158

Not Hispanic or Latino
3,149
99.7%
Hispanic or Latino
4
0.1%
Not Applicable/Not Available
5
0.2%

Total number of samples: 3,158

Disease
AD3,158100.0%
Study Specific Diagnosis
Control1,62651.5%
Case1,27940.5%
Unknown2538.0%

Total number of samples: 3,158

  • 2225 (0.8%)
  • 23365 (11.6%)
  • 24164 (5.2%)
  • 331,209 (38.3%)
  • 341,123 (35.6%)
  • 44260 (8.2%)
  • NA12 (0.4%)