ADGC African American samples were sequenced at University of Miami on the HiSeq3000 machine.  3226 samples were sequenced using the Agilent WES v6 target capture kit. BAM files from hg37 build were sent to GCAD for processing on the VCPA1.1 pipeline. 2763 passed sequencing metrics and quality control.

Total number of samples: 3,144

Female 2,249 71.5 %
Male 895 28.5 %

Total number of samples: 3,144

Black or African American3,141
White3

Total number of samples: 3,144

Not Hispanic or Latino
3,088
98.2%
Hispanic or Latino
8
0.3%
Not Applicable/Not Available
48
1.5%

Total number of samples: 3,144

Disease
AD3,144100.0%
Study Specific Diagnosis
Control1,63752.1%
Case1,28740.9%
Unknown2207.0%

Total number of samples: 3,144

  • 2225 (0.8%)
  • 23365 (11.6%)
  • 24163 (5.2%)
  • 331,198 (38.1%)
  • 341,121 (35.7%)
  • 44260 (8.3%)
  • NA12 (0.4%)