AIM-AI: an Actionable, Integrated and Multiscale genetic map of Alzheimer's disease via deep learning
- PI
- Zhao, Zhongming
- DAR ID
- 11584
- Initial Approval Date
- March 27, 2025
- Current DAR Status
- Active
- PI Institution
- University of Texas Health Science Center at Houston
- PI Institution Country
- United States
- PI Institution Type
- Non-Profit
Requested Datasets (49)
NG00067Alzheimer's Disease Sequencing Project Umbrella StudyNG00108Profiling microglia expression profiles in AD using single-nuclei RNA-seqNG00105MiGA – Microglia Genomic AtlasNG00113Metabolomic and lipidomic signatures in Alzheimer disease brainsNG00114DNA Methylation in Alzheimer disease brainsNG00104Dataset from Clinical and Pathological Studies in the Oldest Old (90+ Study)NG00121Alzheimer’s disease single-neuron whole-genome sequencing - Miller 2022NG00117NCRAD Families GWASNG00127A longitudinal study of Alzheimer's Disease and other dementing illnesses – KnightADRC GWASNG00128Proteomic profiling identified plasma biomarkers for SARS-CoV-2 infection and severity of COVID-19 patientsNG00129NCRAD Families Whole Exome SequencingNG00118AMP-AD SV WGS and SV-xQTL
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NG00134National Health and Aging Trends Study (NHATS) GWASNG00130Large scale CSF proteogenomic atlasNG00144The Prediction of Alzheimer’s Disease through Multi-Trait Genetic ModelingNG00131Large scale genetics study on CSF and brain metabolite levelsNG00135UAB ADRC - University of Alabama at Birmingham Alzheimer’s Disease Research CenterNG00102Genomic atlas of the proteome from brain, CSF and plasma prioritizes proteins implicated in neurological disordersNG00153Health and Retirement Study (HRS) DNA MethylationNG00160Sex-specific genetic architecture of late-life memory performanceNG00022ADC1 - Alzheimer's Disease Center Dataset 1NG00023ADC2 - Alzheimer's Disease Center Dataset 2NG00024ADC3 - Alzheimer's Disease Center Dataset 3NG00068ADC4 - Alzheimer's Disease Center Dataset 4NG00069ADC5 - Alzheimer's Disease Center Dataset 5NG00070ADC6 - Alzheimer's Disease Center Dataset 6NG00071ADC7 - Alzheimer's Disease Center Dataset 7NG00136ADC8 - Alzheimer's Disease Center Dataset 8NG00137ADC9 - Alzheimer's Disease Center Dataset 9NG00138ADC10 - Alzheimer's Disease Center Dataset 10NG00139ADC11 - Alzheimer's Disease Center Dataset 11NG00140ADC12 - Alzheimer's Disease Center Dataset 12NG00149ADC13 - Alzheimer's Disease Center Dataset 13NG00150ADC14 - Alzheimer's Disease Center Dataset 14NG00151ADC15 - Alzheimer's Disease Center Dataset 15NG00159Longitudinal Change in Memory Performance as a Strong Endophenotype for Alzheimer’s Disease – Archer, et al, 2023NG00157Sex-specific genetic predictors of Alzheimer's disease biomarkers – Deming, et al. 2018NG00158Sex differences in the genetic predictors of Alzheimer’s pathology – Dumitrescu, et al. 2019NG00161Sex differences in the genetic architecture of cognitive resilience to Alzheimer's disease – Eissman, et al. 2022NG00145Colorado Adoption/Twin Study of Lifespan behavioral development & cognitive aging (CATSLife) APOENG00103Association Between Common Variants in RBFOX1, an RNA-Binding Protein, and Brain Amyloidosis in Early and Preclinical Alzheimer DiseaseNG00156Genetic variants and functional pathways associated with resilience to Alzheimer's diseaseNG00147Amyloid Neuroimaging and Genetics Initiative (ANGI) GWASNG00165CHARGE Association results from the ADSP R1 WGS data setNG00162Oligodendrocytes single-cell whole genome and RNA sequencingNG00166Association results from the ADSP R3 17k WGS data set - Lee et al., 2023NG00174Whole Genome Sequencing (WGS) and SNP Array data for the SEA-AD Consortium CohortNG00177ADGC Multi-Ancestry GWAS Meta-Analysis – Rajabli et al., 2025NG00175Genome-wide association study of neuropathology endophenotypes
Research Use Statement
Objectives: The objective of our study is to advance our understanding of the genetic basis of Alzheimer’s Disease (AD) through the analysis of comprehensive genomic datasets such as Whole Exome Sequencing (WES), Whole Genome Sequencing (WGS), single-nuclei RNA sequencing, and Genome-Wide Association Studies (GWAS), as well as the related phenotype. We aim to identify genetic variants that are integral to the development and progression of AD.
Study Design: Our approach involves a detailed multi-omics analysis focusing on both coding and non-coding regions within these datasets. We will develop new analytical variables from existing data, ensuring that our research adheres to the established data use limitations and contributes meaningfully to the field of genetic research in AD.
Analysis Plan: The plan centers on investigating the correlation between genetic variants and AD, exploring how these variants influence the disease at a genetic level. We will employ cutting-edge computational methods to analyze interactions between these genetic markers and their potential role in AD pathogenesis. The integration of data from multiple sources will be carefully executed to maintain compliance with data use agreements, emphasizing the scientific exploration of AD.
Study Design: Our approach involves a detailed multi-omics analysis focusing on both coding and non-coding regions within these datasets. We will develop new analytical variables from existing data, ensuring that our research adheres to the established data use limitations and contributes meaningfully to the field of genetic research in AD.
Analysis Plan: The plan centers on investigating the correlation between genetic variants and AD, exploring how these variants influence the disease at a genetic level. We will employ cutting-edge computational methods to analyze interactions between these genetic markers and their potential role in AD pathogenesis. The integration of data from multiple sources will be carefully executed to maintain compliance with data use agreements, emphasizing the scientific exploration of AD.
Non-Technical Summary
Our research is dedicated to unraveling the genetic components of Alzheimer’s Disease. By analyzing genetic sequences and variations through various genomic datasets, we seek to deepen the scientific understanding of how these genetic elements contribute to AD. The outcomes of this study will be shared with the public, enhancing general knowledge of Alzheimer’s Disease and supporting the global research community in its ongoing efforts to decode this complex condition.
Reported Publications
Publications shown are those reported by investigators through NIAGADS DAR reporting and renewal processes and may not represent a complete list of publications associated with the project.
No publications have been reported for this DAR.